TreeMicInterV1, Main, Exploration, bibRecord, 000095

The Aboveground Vegetation Type and Underground Soil Property Mediate the Divergence of Soil Microbiomes and the Biological Interactions.

Identifieur interne : 000095 ( Main/Exploration ); précédent : 000094; suivant : 000096

The Aboveground Vegetation Type and Underground Soil Property Mediate the Divergence of Soil Microbiomes and the Biological Interactions.

Auteurs : Shu-Hong Wu [République populaire de Chine] ; Bing-Hong Huang [Taïwan] ; Chia-Lung Huang [Taïwan] ; Gang Li [République populaire de Chine] ; Pei-Chun Liao [Taïwan]

Source :

Microbial ecology [ 1432-184X ] ; 2018.

RBID : pubmed:28765980

Descripteurs français

KwdFr :
- ADN bactérien (génétique), ARN ribosomique 16S (génétique), Arbres (classification), Arbres (croissance et développement), Bactéries (classification), Bactéries (génétique), Bactéries (isolement et purification), Forêts (MeSH), Microbiologie du sol (MeSH), Microbiote (MeSH), Poaceae (classification), Poaceae (croissance et développement), Rhizosphère (MeSH), Sol (composition chimique), Écosystème (MeSH).
MESH :
- composition chimique : Arbres, Bactéries, Poaceae, Sol.
- croissance et développement : Arbres, Poaceae.
- génétique : ADN bactérien, ARN ribosomique 16S, Bactéries.
- isolement et purification : Bactéries.
- Forêts, Microbiologie du sol, Microbiote, Rhizosphère, Écosystème.

English descriptors

KwdEn :
- Bacteria (classification), Bacteria (genetics), Bacteria (isolation & purification), DNA, Bacterial (genetics), Ecosystem (MeSH), Forests (MeSH), Microbiota (MeSH), Poaceae (classification), Poaceae (growth & development), RNA, Ribosomal, 16S (genetics), Rhizosphere (MeSH), Soil (chemistry), Soil Microbiology (MeSH), Trees (classification), Trees (growth & development).
MESH :
- chemical , chemistry : Soil.
- chemical , genetics : DNA, Bacterial, RNA, Ribosomal, 16S.
- classification : Bacteria, Poaceae, Trees.
- genetics : Bacteria.
- growth & development : Poaceae, Trees.
- isolation & purification : Bacteria.
- Ecosystem, Forests, Microbiota, Rhizosphere, Soil Microbiology.

Abstract

The composition of the soil microbiome is influenced by environmental (abiotic) variables and biological interactions (biotic factors). To determine whether the aboveground vegetation and soil physicochemical properties were the main determinant of beta-diversity and biological interaction of soil microbial community, we sampled soils from the temperate coniferous forest and grassland. Clustering of operational taxonomic units was conducted using 16S rRNA gene. We found that the microbial composition of the rhizospheres, in which root exudates influence the microbial environment, show lower alpha-diversity than that of nonroot soils. The nonsignificant rhizosphere effect suggested other undetermined factors or stochastic processes accounted for microbial diversity in the rhizosphere. More significant microbe-microbe interactions were observed in forest and rhizosphere soils relative to the grassland soils. The elevated number of positive correlations for relative abundances in forest soil implied beneficial associations being common among bacteria, in particular within the rhizosphere environment. The particular soil properties generated by root exudates also alter the physicochemical properties of soil such as K and pH value, and might in turn favor the adoption of teamwork-cooperation strategies for microbe-microbe interactions, represented as large clusters of positive associations among bacterial taxa. Specific biological interactions differentiated the microbiomes within forest soils. Thus, the environmental selection pressure of aboveground vegetation accounts for differences between soil microbiomes while biotic factors are responsible for fine-scale differences of the microbial community in forest soils.

DOI: 10.1007/s00248-017-1050-7
PubMed: 28765980

Affiliations:

République populaire de Chine, Taïwan

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000129
to stream Main, to step Curation: 000129

Le document en format XML

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<front><div type="abstract" xml:lang="en">The composition of the soil microbiome is influenced by environmental (abiotic) variables and biological interactions (biotic factors). To determine whether the aboveground vegetation and soil physicochemical properties were the main determinant of beta-diversity and biological interaction of soil microbial community, we sampled soils from the temperate coniferous forest and grassland. Clustering of operational taxonomic units was conducted using 16S rRNA gene. We found that the microbial composition of the rhizospheres, in which root exudates influence the microbial environment, show lower alpha-diversity than that of nonroot soils. The nonsignificant rhizosphere effect suggested other undetermined factors or stochastic processes accounted for microbial diversity in the rhizosphere. More significant microbe-microbe interactions were observed in forest and rhizosphere soils relative to the grassland soils. The elevated number of positive correlations for relative abundances in forest soil implied beneficial associations being common among bacteria, in particular within the rhizosphere environment. The particular soil properties generated by root exudates also alter the physicochemical properties of soil such as K and pH value, and might in turn favor the adoption of teamwork-cooperation strategies for microbe-microbe interactions, represented as large clusters of positive associations among bacterial taxa. Specific biological interactions differentiated the microbiomes within forest soils. Thus, the environmental selection pressure of aboveground vegetation accounts for differences between soil microbiomes while biotic factors are responsible for fine-scale differences of the microbial community in forest soils.</div>
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<ReferenceList><Reference><Citation>Folia Microbiol (Praha). 2004;49(2):105-11</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15227779</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 2012 Sep 10;506(1):18-24</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22766402</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Environ Microbiol. 2010 Nov;12(11):2885-93</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20545741</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2005 Jul;56(417):1761-78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15911555</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Rev Microbiol. 2012 Jul 16;10(8):538-50</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22796884</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2001 Dec;67(12):5849-54</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11722945</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Commun. 2013;4:1434</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23385579</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2012 Sep;6(9):1653-64</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22456445</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 1995 Oct;61(10):3667-75</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16535147</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 1976 Apr 30;192(4238):463-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17731084</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Rev. 2013 Nov;37(6):936-54</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23550883</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2007 Feb 20;104(8):2761-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17296935</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 1998 Mar;8(3):186-94</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9521922</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ecology. 2011 Jun;92(6):1332-43</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21797161</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2011 Aug 15;27(16):2194-200</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21700674</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2015 Nov 6;350(6261):663-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26542567</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Antonie Van Leeuwenhoek. 2015 Feb;107(2):575-88</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25527391</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ecology. 2013 Oct;94(10):2275-87</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24358713</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Glob Chang Biol. 2016 Jan;22(1):198-207</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26340501</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Front Microbiol. 2011 May 30;2:93</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21747801</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2009 Aug;75(15):5111-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19502440</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Environ Microbiol. 2007 May;9(5):1101-11</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17472627</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2015 May 19;112(20):6449-54</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25941371</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Methods. 2010 May;7(5):335-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20383131</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2008 Feb;74(3):738-44</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18083870</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 1974 Jul 5;185(4145):27-39</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17779277</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Oecologia. 2001 Oct;129(2):271-280</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28547606</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Ecol. 2014 Mar;23(6):1571-83</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24148029</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2007 Jan;35(Database issue):D169-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17090583</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Adv Biochem Eng Biotechnol. 2003;78:51-74</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12674398</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microb Ecol. 2014 Aug;68(2):247-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24658414</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2014 Nov 10;9(11):e112609</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25383887</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2014 Apr;8(4):790-803</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24196324</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2010 Feb;4(2):171-81</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19829318</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2009 Dec;75(23):7537-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19801464</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Microbiol. 2003;57:369-94</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14527284</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Appl Environ Microbiol. 2006 Feb;72(2):1258-66</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16461674</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ecology. 2007 Jun;88(6):1354-64</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17601128</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>AoB Plants. 2015 Mar 27;7:null</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25818073</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 1998 Mar;8(3):175-85</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9521921</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Environ Microbiol. 2014 Jun;16(6):1918-34</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24571618</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2013 Jul;7(7):1310-21</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23446837</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>ISME J. 2011 Sep;5(9):1406-13</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21368908</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEMS Microbiol Ecol. 2009 Apr;68(1):1-13</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19243436</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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	Serveur d'exploration sur les interactions arbre microorganisme
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The Aboveground Vegetation Type and Underground Soil Property Mediate the Divergence of Soil Microbiomes and the Biological Interactions.

The Aboveground Vegetation Type and Underground Soil Property Mediate the Divergence of Soil Microbiomes and the Biological Interactions.

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